Web1 Jun 2024 · Here we introduce SnapHiC2, which adapts a sliding window approximation when imputing missing contacts in each single cell and reduces both memory usage and computational time by 70%. SnapHiC2 can identify 5 Kb resolution chromatin loops with high sensitivity and accuracy and help to suggest target genes for GWAS variants in a cell … Web4 Oct 2024 · SnapHiC2: A computationally efficient loop caller for single cell Hi-C data Computational and Structural Biotechnology Journal June 1, 2024 See publication Leveraging TOPMed imputation server and...
SnapHiC2: A computationally efficient loop caller for single cell Hi …
WebSnapHiC2: A computationally efficient loop caller for single cell Hi-C data Computational and Structural Biotechnology Journal 2024 Journal article DOI: 10.1016/j.csbj.2024.05.046 Contributors : Xiaoqi Li; Lindsay Lee; Armen Abnousi; Miao Yu; Weifang Liu; Le Huang; Yun Li; Ming Hu Show more detail Source : Crossref Web1 Jul 2024 · SnapHiC2: A computationally efficient loop caller for single cell Hi-C data 2024, Computational and Structural Biotechnology Journal Show abstract Understanding the function of regulatory DNA interactions in the interpretation of non-coding GWAS variants 2024, Frontiers in Cell and Developmental Biology fnbo foundation
Department of Genetics Publications for June 5th – 18th, 2024
WebThe Virtual Health Library is a collection of scientific and technical information sources in health organized, and stored in electronic format in the countries of the Region of Latin America and the Caribbean, universally accessible on the Internet and compatible with international databases. WebNumber: Citing Articles: 1: Zhao S, Hong CKY, Myers CA, Granas DM, White MA, Corbo JC, Cohen BA. A single-cell massively parallel reporter assay detects cell-type-specific gene re Web26 Aug 2024 · SnapHiC-D, a computational pipeline to identify differential chromatin contacts (DCCs) between two scHi-C datasets, is presented and it is demonstrated that DCCs detected in the cortical and hippocampal cell types are generally correlated with cell-type-specific gene expression patterns and epigenomic features. PDF. greentech robotics